What is the GST Refund? Process, Types, and Latest Updates

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What is the GST Refund? Process, Types, and Latest Updates

Pavan Joshi
Compliance & Advisory Expert
Published on October 16, 2025

Expert in MSME, taxation, and business compliance with hands-on experience helping startups and enterprises stay legally compliant.

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A GST refund refers to the reimbursement of excess tax paid by a registered taxpayer under the Goods and Services Tax (GST) system. Refunds typically arise from exports, inverted tax structures, SEZ supplies, excess payments, or balances in the electronic cash ledger. Timely filing of GST refunds ensures smooth cash flow, business liquidity, and compliance with GST laws.

Understanding GST Refund

A GST refund is essentially the process of getting back the excess amount of GST paid to the government. Businesses often pay more tax due to input-output mismatches, export transactions, or system errors. The government allows eligible taxpayers to claim refunds under Section 54 of the CGST Act, 2017.

Types of GST Refunds

The GST law specifies several categories under which a refund can be claimed:

  1. ITC accumulated due to Inverted Tax Structure (Clause (ii) of first proviso to section 54(3))
  2. Exports of Goods or Services – Without Payment of Tax (accumulated ITC)
  3. Export of Services – With Payment of Tax
  4. Supplies made to SEZ Unit/Developer – With Payment of Tax
  5. Supplies made to SEZ Unit/Developer – Without Payment of Tax
  6. Refund by Supplier of Deemed Exports
  7. Refund by Recipient of Deemed Exports
  8. Excess Payment of Tax
  9. Excess Balance in Electronic Cash Ledger
  10. Refund due to Assessment/Appeal/Revision/Other Order
  11. Tax Paid on Intra-State Supply later held as Inter-State (and vice versa)
  12. Refund on Inward Supplies by Canteen Store Department (CSD)
  13. Any other specified reason

When Should the GST Refund Be Filed?

The refund claim must be filed within 2 years from the relevant date — which varies depending on the type of refund (for example, date of export, date of excess payment, or final assessment date).

Filing within this period ensures validity and timely processing by GST authorities.

Step-by-Step Process of GST Refund

  1. Application Filing (Form GST RFD-01)

    Taxpayers must submit Form GST RFD-01 electronically via the GST Portal. This form is used for claiming refunds on various grounds like exports, inverted duty structure, or excess tax.

  1. Acknowledgment (Form GST RFD-02)

    After successful submission, an acknowledgment number is generated (via SMS/email), confirming receipt of the refund application.

  1. Adjustment in Credit and Cash Ledgers

    The claimed Input Tax Credit (ITC) amount is automatically debited from the Electronic Credit Ledger to prevent reuse for other liabilities.

  1. Scrutiny by GST Officer

    Refund applications are scrutinized within 60 days. If all documents are correct, the refund proceeds; otherwise, a deficiency memo (Form RFD-03) is issued.

  1. Pre-Audit (If Applicable)

    Large refund amounts undergo pre-audit before sanction to ensure the legitimacy of the claim.

  1. Refund Disbursement

    Approved refunds are issued via:

  • Form GST RFD-06 (Refund Sanction/Rejection Order)

  • Form GST RFD-05 (Payment Advice)
    Refunds are then credited electronically to the taxpayer’s registered bank account.

Important GST Refund Forms


Form No.

Description

RFD-01 / 1A

Refund Application

RFD-02

Acknowledgement

RFD-03

Notice for Deficiency

RFD-04

Provisional Refund Order

RFD-05

Payment Advice

RFD-06

Refund Sanction/Rejection Order

RFD-07

Refund Adjustment Order

RFD-08

Show Cause Notice

RFD-09

Reply to SCN

RFD-10

Refund by Specified Agencies

RFD-11

Bond/LUT Format

In 2025, the GSTN introduced major updates to the refund filing system to make the process more transparent and efficient.

Categories Affected

  1. Export of Services (with payment of tax)

  2. Supplies to SEZ Units/Developers (with payment of tax)

  3. Refunds claimed by Suppliers in Deemed Exports

Key Changes

1. Removal of ‘From’ and ‘To’ Tax Periods

Taxpayers no longer need to select tax periods while filing refund claims. Simply choose the refund category and proceed to create the application.

2. Shift to Invoice-Based Filing

Refund claims are now invoice-wise instead of tax period-wise.

Specific statements for refund categories:

  • Export of Services → Statement 2

  • SEZ Supplies → Statement 4

  • Deemed Exports → Statement 5B

3. Locking of Uploaded Invoices

Invoices uploaded in refund applications are locked to prevent duplicate claims. They can only be unlocked if the application is withdrawn or a deficiency memo is issued.

4. Return Filing Prerequisite

All GSTR-1 and GSTR-3B returns must be filed before submitting a refund claim. Refunds will not be processed unless this condition is met.

Benefits of the New GST Refund Process

  • Greater Accuracy: Invoice-wise filing reduces duplication.

  • Enhanced Audit Trail: Detailed data helps during inspections.

  • Better Traceability: Refunds can be tracked at the invoice level.

  • Reduced Fraud: Locked invoices prevent multiple claims.

Documents Required for GST Refund

1. Refund of Excess Balance in Electronic Cash Ledger

No supporting documents required other than Form RFD-01.

2. Refund on Export of Goods (With Payment of Tax)

  • Export Invoice

  • Shipping Bills / Bill of Lading

  • BRC/FIRC

  • GSTR-1 & GSTR-3B

  • Export General Manifest (EGM)

  • Declaration under Rule 89(2)(f)

3. Export Without Payment of Tax (LUT/Bond)

  • LUT/Bond Copy

  • Export Invoices

  • BRC/FIRC

  • Shipping Bill

  • Statement 3A (Refund claim details)

  • Declaration under Rule 89(2)(b)

4. Inverted Duty Structure Refund

  • Statement 1 of RFD-01

  • Purchase & Sale Invoices

  • GSTR-2A/2B

  • Calculation Sheet

  • Declaration under Rule 89(2)(h)

5. Supplies to SEZ Units/Developers

  • SEZ Officer Endorsement

  • SEZ Approval Letter

  • Invoices issued to SEZ

  • GSTR-1 & GSTR-3B

  • Declaration under Rule 89(2)(d)/(e)

6. Excess Tax Paid

  • Proof of Excess Payment

  • Revised Returns (if applicable)

  • Calculation Sheet

7. Finalization of Provisional Assessment

  • Final Assessment Order

  • Calculation Sheet

  • Supporting Documents

8. Refund Due to Court or Appellate Order

  • Copy of Judgment/Order

  • Refund Calculation as per Order

Conclusion

Filing a GST Refund correctly and on time is essential for maintaining business liquidity and ensuring compliance. The 2025 invoice-based refund system enhances transparency, reduces fraud, and speeds up refund processing for genuine taxpayers. Businesses should keep proper documentation and ensure regular filing of GST returns to make refund claims smooth, accurate, and error-free.

Frequently Asked Questions (FAQs) on GST Refund

  1. What is a GST refund?

    A GST refund is the process of getting back the excess tax paid by a registered taxpayer under the GST system. It applies to cases like exports, inverted duty structure, excess payment, or SEZ supplies.

  1. Who can claim a GST refund?

    Any registered taxpayer under GST can claim a refund if they have paid excess tax, exported goods/services, supplied to SEZ units, or faced an inverted tax structure where input taxes exceed output taxes.

  1. How can I apply for a GST refund online?

    You can file for a refund using Form GST RFD-01 on the GST Portal. After submission, you receive an acknowledgment (Form RFD-02), and the application is processed by the GST officer.

  1. What is the time limit for filing a GST refund?

    Refund applications must be filed within 2 years from the relevant date (for example, the date of export, excess tax payment, or final assessment order).

  1. How long does it take to get a GST refund?

    Usually, the refund is processed within 60 days from the date of submission. If it exceeds this period without valid reason, interest is payable to the taxpayer.

  1. What are the latest changes in the GST refund process (2025)?

    In 2025, GST introduced an invoice-based refund system.

  • The “From–To” tax period selection was removed.

  • Refunds are now filed invoice-wise, not month-wise.

  • Uploaded invoices are locked to prevent duplicate claims.

  • All due returns (GSTR-1 & GSTR-3B) must be filed before refund submission.

  1. What documents are required for GST refund on exports?

    You need:

  • Export invoices

  • Shipping bills

  • BRC/FIRC

  • GSTR-1 & GSTR-3B copies

  • Export General Manifest (EGM)

  • Declaration under Rule 89(2)(f)

  1. Can I claim GST refund for excess balance in the electronic cash ledger?

    Yes. You can claim this refund using Form RFD-01 — no additional documents are needed except the form itself.

  1. What is the difference between export with payment of tax and without payment of tax?

  • With payment of tax: Exporter pays IGST and later claims a refund.

  • Without payment of tax (under LUT/Bond): Exporter does not pay IGST but can claim a refund of accumulated ITC.

  1. What happens if my refund application is rejected?

    If your refund claim is rejected (via Form RFD-06 or RFD-08), you can reply using Form RFD-09 and provide clarification or supporting documents.

  1. Can invoices be edited after filing a refund application?

    No, once invoices are uploaded with a refund claim, they are locked. They can only be edited if the refund application is withdrawn or a deficiency memo is issued by the GST officer.

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